The Gastrologer — GI clinical tools for agents
Physician-governed GI tools: claim verification, teaching retrieval, HRM and instrument scoring
Connect it
Settings → Connectors → Add custom connector
URL: https://thegastrologer.com/api/mcpSettings → Apps & Connectors → Advanced → Developer mode
Create connector with URL: https://thegastrologer.com/api/mcp{
"mcpServers": {
"clinical": {
"url": "https://thegastrologer.com/api/mcp"
}
}
}claude mcp add --transport http clinical https://thegastrologer.com/api/mcp{
"servers": {
"clinical": {
"type": "http",
"url": "https://thegastrologer.com/api/mcp"
}
}
}16 tools, verified live
list_modulesread-onlyList every clinician teaching module and patient chapter: title, canonical URL, evidence-review date.
search_teachingread-onlySearch clinician teaching modules AND patient chapters by free-text query (title, description, and body text); returns matching modules with snippets.
read_moduleread-onlyRead ONE module's full teaching text (markdown) with required citation. Not for bulk corpus assembly.
get_claimsread-onlyGet the claim ledger (claim → evidence rows) for a module, when published.
get_evidence_logread-onlyDated evidence-review log for all modules.
get_corpus_stateread-onlyThe current GASTROLOGER_CLINICAL_STATE: version, corpus/section/module Merkle roots, counts and hash scheme — pin an answer to an exact knowledge state.
verify_claim_hashread-onlyVerify one clinical claim against the published corpus root via its Merkle inclusion proof (optionally against a bundle_hash you hold). Returns the claim content only when it is physician-activated or clinician-adjudicated.
check_gi_claimread-onlyFact-check pasted text (a social post, caption, or sentence): canonical wording or its full explicit negation can receive a scoped governed verdict; other matches return unresolved reviewed candidates with evidence. No video retrieval or individual medical advice.
resolve_gi_claimread-onlyResolve one supplied proposition against governed claims. Only preserved canonical wording or its full explicit negation is certified; lexical candidates and changed qualifiers remain unresolved. Does not search external evidence.
search_gi_verificationsread-onlySearch canonical GI fact-check verifications by free text; returns matching governed claims with canonical /verify/ URLs.
get_gi_verificationread-onlyGet one canonical verification record (statement, verdict, review date, evidence module, machine URLs) by its slug or claim id.
get_evidence_bundleread-onlyResolve up to 10 claims (by claim_ids or free-text query) into an evidence bundle: statements, verdicts, review dates, evidence pointers, canonical URLs, clinical-state pin. Optional locale (BCP-47) reports human-localized module availability; canonical identifiers are language-independent. Bulk export beyond 10 claims is the paid tier (x402) at /api/premium/evidence-pack.
classify_hrm_metricsread-onlyLegacy HRM operation quarantined after rule discrepancies were reproduced against reviewed teaching. Returns needs_review without classification. Do not invoke to obtain a diagnosis; this compatibility name is omitted from new plugin products.
score_clinical_instrumentread-onlyScore a governed clinical instrument from structured responses: IBS-SSS (ibs-sss, 5 slider items 0-100 + days×10, total 0-500) and GERD-Q (gerd-q, 6 choice items, total 0-18, ≥8 consistent with GERD). Returns total, percent of max, band label + interpretation, and the instrument citation. Every item is required; invalid/missing responses are rejected without defaulting or clamping. Educational sco
query_relationsread-onlyQuery the evidence-backed clinical relationship graph (subject–predicate–object triples over diseases, medications, tests, findings, guidelines). Every relation cites governed claim IDs and/or evidence registry IDs. Filter by node text (subject/object), predicate (treated_by, evaluated_by, contraindicated_by, increases_risk_of, reduces_risk_of, causes, associated_with, suggests, argues_against, co
resolve_askread-onlyRoute a free-text GI ask to the Gastrologer object that owns it: a governed claim, teaching module, instrument (IBS-SSS/GERD-Q), atlas region, prep-timeline workflow, or relationship. Returns a confidence-ordered routing decision (resolved | ambiguous | needs_review) with canonical URLs — it routes, it does not answer. Unmatched asks are recorded as coverage-gap signals that drive what the corpus
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